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Ecological Questions

Escherichia coli concentrations and antibiotic resistance profile in nearshore waters of Manila Bay, Philippines
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Escherichia coli concentrations and antibiotic resistance profile in nearshore waters of Manila Bay, Philippines

Authors

  • Aaron Jan Palmares Far Eastern University Manila https://orcid.org/0000-0001-5552-7342
  • Jianina Lauryne Morabe Far Eastern University
  • Ma. Liezl Parazo Far Eastern University
  • Mary Izabelle Maddara Far Eastern University
  • Dyve John Rodas Far Eastern University
  • Erica Placino Far Eastern University
  • Reynato Rodriguez III Far Eastern University
  • Cybelle Alyxes Nicolas Far Eastern University

DOI:

https://doi.org/10.12775/EQ.2026.033

Keywords

Escherichia coli, antimicrobial resistance, fecal contamination, nearshore waters, Manila Bay

Abstract

This study investigates the extent of microbial contamination and antimicrobial resistance (AMR) in the nearshore waters of Manila Bay, Philippines, a region heavily impacted by urbanization and anthropogenic pollution. Forty water samples were collected from five coastal sites and analyzed for physicochemical parameters, Escherichia coli (E. coli) concentrations, and antimicrobial susceptibility. Results revealed E. coli levels averaging 17,300 CFU/100 mL, which significantly exceeded national water quality standards and indicated severe and sustained fecal contamination. Physicochemical conditions (mean turbidity of 10.8 NTU, pH 7.35, low dissolved oxygen at 1.46 mg/L, and high conductivity at 22,509 µS/cm) support short-term bacterial survival. Antimicrobial susceptibility testing of 40 E. coli isolates showed resistance to at least one antibiotic in 70% of isolates, with 20% classified as multiple antibiotic-resistant (MAR) and 17.5% as multidrug-resistant (MDR). Ampicillin resistance was most common (60%), followed by gentamicin (25%), cotrimoxazole (22.5%), and ciprofloxacin (12.5%). No extended-spectrum beta-lactamase (ESBL)-producing strains were detected. Correlation analyses found significant associations between E. coli concentration and turbidity (positive) and conductivity (negative), but no significant link between resistance levels and physicochemical parameters, suggesting resistance development is driven by other environmental or genetic factors. These findings underscore the urgent need for integrated water quality management, stricter pollution control, and enhanced AMR surveillance to protect public health and the marine environment. The study highlights Manila Bay as a critical hotspot for microbial pollution and antibiotic resistance, warranting immediate action and continued monitoring.

References

Addisie, M. B., 2022, Evaluating drinking water quality using water quality parameters and esthetic attributes. Air, Soil and Water Research. Air, Soil and Water Research, 15: 1–8. https://doi.org/10.1177/11786221221075005

Adesakin, T. A., Oyewale, A. T., Bayero, U., Mohammed, A. N., Aduwo, I. A., Ahmed, P. Z., Abubakar, N. D., & Barje, I. B., 2020. Assessment of bacteriological quality and physico-chemical parameters of domestic water sources in Samaru community, Zaria, Northwest Nigeria. Heliyon, 6(8), e04773. https://doi.org/10.1016/j.heliyon.2020.e04773

Agwu, O. A., Oluwagunke, T., & Ebohon, J., 2017, Survival and growth rate of coastal water Escherichia coli isolates in different salt concentrations. Ife Journal of Science, 19(1): 41. https://doi.org/10.4314/ijs.v19i1.6

Ancheta, A. A., 2021, Sustaining Esturial Creeks: Water Corridors in Mitigating Flooding in Manila, Philippines. IOP Conference Series: Earth and Environmental Science, 799: 012004. https://doi.org/10.1088/1755-1315/799/1/012004

ARSP, 2024, Antimicrobial Resistance Surveillance Program Annual Report - 2023. In Department of Health - Research Institute for Tropical Medicine.

Azuma, T., Uchiyama, T., Zhang, D., Usui, M., & Hayashi, T., 2022, Distribution and characteristics of carbapenem-resistant and extended-spectrum β-lactamase (ESBL) producing Escherichia coli in hospital effluents, sewage treatment plants, and river water in an urban area of Japan. Science of the Total Environment, 839: 156232. https://doi.org/10.1016/j.scitotenv.2022.156232

Bonnin, R. A., Bernabeu, S., Emeraud, C., Creton, E., Vanparis, O., Naas, T., Jousset, A. B., & Dortet, L., 2022, Susceptibility of OXA-48-producing Enterobacterales to imipenem/relebactam, meropenem/vaborbactam and ceftazidime/avibactam. International Journal of Antimicrobial Agents, 60(4): 106660. https://doi.org/10.1016/j.ijantimicag.2022.106660

Brepoels, P., De Wit, G., Lories, B., Belpaire, T. E. R., & Steenackers, H. P., 2024, Selective pressures for public antibiotic resistance. Critical Reviews in Microbiology, 51(3): 417–426. https://doi.org/https://doi.org/10.1080/1040841X.2024.2367666

Cardos, H. B., Dalmacio, L. M. M., & Balolong, M. P, 2023, Bacterial composition and antibiotic resistome profile of water in the Manila Bay South Harbor. SciEnggJ, 16(2): 254–267.

Carney, R. L., Labbate, M., Siboni, N., Tagg, K. A., Mitrovic, S. M., & Seymour, J. R., 2019, Urban beaches are environmental hotspots for antibiotic resistance following rainfall. Water Research, 167, 115081. https://doi.org/10.1016/j.watres.2019.115081

Carreon, P. B., Bombeo, H. P., Castillo, T. J., Closa, J. M., Damaso, J. M., Gellecanao, F., & Palmares, A. J., 2025, Antimicrobial susceptibility profile of gram - negative bacteria isolated from selected hot springs in Laguna , Philippines. Journal of Applied and Natural Science, 17(4), 1550–1560. https://doi.org/https://doi.org/10.31018/jans.v17i4.6860

Chen, J., Hsu, B., Ko, W., & Wang, J., 2023, Ecotoxicology and Environmental Safety Comparison of antibiotic-resistant Escherichia coli and extra-intestinal pathogenic E. coli from main river basins under different levels of the sewer system development. Ecotoxicology and Environmental Safety, 263(138): 115372. https://doi.org/10.1016/j.ecoenv.2023.115372

CLSI, 2021, M100 Performance Standards for Antimicrobial Susceptibility Testing (31st ed.). Clinical Laboratory Standards Institute.

Collignon, P. J., & McEwen, S. A., 2019, One health-its importance in helping to better control antimicrobial resistance, Tropical Medicine and Infectious Disease, 4: 11. https://doi.org/10.3390/tropicalmed4010022

Dela Peña, L. B. R. O., Nacario, M. A. G., Bolo, N. R., & Rivera, W. L., 2022, Multiple antibiotic resistance in Escherichia coli isolates from fecal and water sources in Laguna Lake, Philippines. Water, 14: 1517. https://doi.org/10.3390/w14091517

DENR, 2015, DENR MC 2015-006 Guidelines for recreational waters monitoring program. Department of Environment and Natural Resources, Republic of the Philippines.

DENR, 2016, DENR AO 2016-08. Water quality guidelines and general effluent standards of 2016. Department of Environment and Natural Resources, Republic of the Philippines.

Enova, A. E. R., Singh, R. R., Aga, D. S., Mariano, S. M. F., Villanoy, C. L., & Jaraula, C. M. B, 2025, Modeling pharmaceutical contaminant transport in an urban coastal estuarine system: The case of Manila Bay, Philippines. ACS ES and T Water, 5(1): 156–157. https://doi.org/10.1021/acsestwater.4c00736

Essert, S. M., Zacharias, N., Precht, T., Pankratz, D., Funken, K., Mutters, N. T., Kistemann, T., & Schreiber, C., 2023, Persistence of MRSA and ESBL-producing E. coli and K. oxytoca in river water. Hygiene and Environmental Health Advances, 7: 100072. https://doi.org/10.1016/j.heha.2023.100072

Estabillo, C. F., Hingpit, M., John, O., Lacambra, R., Cuyugan, C., Gellecanao, F., & Palmares, A. J., 2025, Assessment of microbial quality of bottled water from street vendors and sundry stores in Metro Manila , Philippines. Journal of Applied and Natural Science, 17(4), 1591–1599. https://doi.org/https://doi.org/10.31018/jans.v17i4.6861

Farias, P., Santo, C. E., Branco, R., Francisco, R., Santos, S., Hansen, L., Sorensen, S., & Morais, P. V., 2015, Natural hot spots for gain of multiple resistances: Arsenic and antibiotic resistances in heterotrophic, aerobic bacteria from marine hydrothermal vent fields. Applied and Environmental Microbiology, 81(7): 2534–2543. https://doi.org/10.1128/AEM.03240-14

Fodor, A., Abate, B. A., Deák, P., Fodor, L., Gyenge, E., Klein, M. G., Koncz, Z., Muvevi, J., Ötvös, L., Székely, G., Vozik, D., & Makrai, L., 2020, Multidrug resistance (MDR) and collateral sensitivity in bacteria, with special attention to genetic and evolutionary aspects and to the perspectives of antimicrobial peptides—a review. Pathogens, 9(7): 1–55. https://doi.org/10.3390/pathogens9070522

Huey, G. M., & Meyer, M. L., 2010, Turbidity as an indicator of water quality in diverse watersheds of the upper Pecos River Basin. Water (Switzerland), 2(2): 273–284. https://doi.org/10.3390/w2020273

Jacinto, G. S., Sotto, L. P. A., Senal, M. I. S., Diego-McGlone, M. L. S., Escobar, M. T. L., Amano, A., & Miller, T. W, 2011, Hypoxia in Manila Bay, Philippines during the northeast monsoon. Marine Pollution Bulletin, 63: 243–248. https://doi.org/10.1016/j.marpolbul.2011.02.026

Jiang, X., Liu, L., Chen, J., Fan, X., Xie, S., Huang, J., & Yu, G, 2021, Antibiotic resistance genes and mobile genetic elements in a rural river in Southeast China: Occurrence, seasonal variation and association with the antibiotics. Science of the Total Environment, 778: 146131. https://doi.org/10.1016/j.scitotenv.2021.146131

Larsson, D. G. J., & Flach, C. F., 2022, Antibiotic resistance in the environment. Nature Reviews Microbiology, 20(5): 257–269. https://doi.org/10.1038/s41579-021-00649-x

Leonard, A. F. C., Zhang, L., Balfour, A. J., Garside, R., Hawkey, P. M., Murray, A. K., Ukoumunne, O. C., & Gaze, W. H., 2018, Exposure to and colonisation by antibiotic-resistant E. coli in UK coastal water users: Environmental surveillance, exposure assessment, and epidemiological study (Beach Bum Survey). Environment International, 114: 326–333. https://doi.org/10.1016/j.envint.2017.11.003

Liang, X., Guan, F., Chen, B., Luo, P., Guo, C., Wu, G., Ye, Y., Zhou, Q., & Fang, H., 2020, Spatial and seasonal variations of antibiotic resistance genes and antibiotics in the surface waters of Poyang Lake in China. Ecotoxicology and Environmental Safety, 196: 110543. https://doi.org/10.1016/j.ecoenv.2020.110543

Maal-Bared, R., Bartlett, K. H., Bowie, W. R., & Hall, E. R., 2013, Phenotypic antibiotic resistance of Escherichia coli and E. coli O157 isolated from water, sediment and biofilms in an agricultural watershed in British Columbia. Science of the Total Environment, 443: 315–323. https://doi.org/10.1016/j.scitotenv.2012.10.106

Nappier, S. P., Liguori, K., Ichida, A. M., Stewart, J. R., & Jones, K. R., 2020, Antibiotic resistance in recreational waters: State of the science. International Journal of Environmental Research and Public Health, 17(21): 1–28. https://doi.org/10.3390/ijerph17218034

Osorio, E. D., Tanchuling, M. A. N., & Diola, M. B. L. D., 2021, Microplastics occurrence in surface waters and sediments in five river mouths of Manila Bay. Frontiers in Environmental Science, 9: 719274. https://doi.org/10.3389/fenvs.2021.719274

Palmares, A. J., Rongalirios, J. J., Santos, M., Siggaoat, M. J., Sucgang, P. L., Tipa, N. N., Torres, J. C. A., Vasquez, C. A., Viernes, A. M., & Gellecanao, F., 2024, The antibiotic resistance profile of Escherichia coli from selected estuaries in the City of Manila, Philippines. Asian Journal of Water, Environment and Pollution, 21(6): 15–22. https://doi.org/ 10.3233/AJW240068

Palmares, A. J., Tacsagon, K. J., Taopo, F. C., Taroma, X., Toledo, S., Torres, I. S., Ventura, J. R., Villanueva, A. M., Yamat, L. G., & Gellecanao, F., 2025, Antibiotic resistance profile of Escherichia coli from Marikina River in the Philippines : Environmental and public health implications. Journal of Applied and Natural Science, 17(2).

Rafailidis, P. I., & Kofteridis, D., 2021, Proposed amendments regarding the definitions of multidrug-resistant and extensively drug-resistant bacteria. Expert Review of Anti-Infective Therapy. https://doi.org/10.1080/14787210.2021.1945922

Rousham, E. K., Unicomb, L., & Islam, M. A., 2018, Human, animal and environmental contributors to antibiotic resistance in low-resource settings: Integrating behavioural, epidemiological and one health approaches. Proceedings of the Royal Society B: Biological Sciences, 285: 20180332. https://doi.org/10.1098/rspb.2018.0332

Shah, A., Arjunan, A., Baroutaji, A., & Zakharova, J., 2023, A review of physicochemical and biological contaminants in drinking water and their impacts on human health. Water Science and Engineering, 16(4): 333–344. https://doi.org/10.1016/j.wse.2023.04.003

Sila, O. N., 2019, Physico-chemical and bacteriological quality of water sources in rural settings, a case study of Kenya, Africa. Scientific African, 2: e00018. https://doi.org/10.1016/j.sciaf.2018.e00018

Smith, R. P., Paiba, G. A., & Ellis-Iversen, J., 2008, Turbidity as an indicator of Escherichia coli presence in water troughs on cattle farms. Journal of Dairy Science, 91(5): 2082–2085. https://doi.org/10.3168/jds.2007-0597

Suzuki, S., Ogo, M., Miller, T. W., Shimizu, A., Takada, H., & Siringan, M. A. T., 2013, Who possesses drug resistance genes in the aquatic environment?: Sulfamethoxazole (SMX) resistance genes among the bacterial community in water environment of Metro-Manila, Philippines. Frontiers in Microbiology, 4: 102. https://doi.org/10.3389/fmicb.2013.00102

Suzuki, Y., Nazareno, J., Nakano, R., Mondoy, M., Nakano, A., & Bugayong, P., 2020, Environmental Presence and Genetic Characteristics of Carbapenemase-Producing Enterobacteriaceae from Hospital Sewage and River Water in the Philippines. Applied and Environmental Microbiology, 86(2): e01906-19.

Sy, K. H., & Ong, A. K., 2023, Fecal Coliform Reduction Management in Manila Bay Bathing Beaches: A Case Study in the Philippines. Proceedings of the First Australian International Conference on Industrial Engineering and Operations Management, Sydney, Australia, December 20-21, 2022, 1161–1166. https://doi.org/10.46254/au01.20220250

Vallejo, B. M., Aloy, A. B., Ocampo, M., Conejar-Espedido, J., & Manubag, L. M., 2019, Manila bay ecology and associated invasive species. In Impacts of Invasive Species on Coastal Environments, 29: 45–169. Coastal Research Library. https://doi.org/10.1007/978-3-319-91382-7_5

Wang, Z., Han, M., Li, E., Liu, X., Wei, H., Yang, C., Lu, S., & Ning, K., 2020, Distribution of antibiotic resistance genes in an agriculturally disturbed lake in China: Their links with microbial communities, antibiotics, and water quality. Journal of Hazardous Materials, 393, 122426. https://doi.org/10.1016/j.jhazmat.2020.122426

Yoneda, I., Rozanah, U. N., Nishiyama, M., Mith, H., & Watanabe, T., 2022, Detection and genetic analysis of Escherichia coli from Tonle Sap Lake and its tributaries in Cambodia: Spatial distribution, seasonal variation, pathogenicity, and antimicrobial resistance. Environmental Pollution, 315, 120406. https://doi.org/10.1016/j.envpol.2022.120406

Zhai, R., Fu, B., Shi, X., Sun, C., Liu, Z., Wang, S., Shen, Z., Walsh, T. R., Cai, C., Wang, Y., & Wu, C, 2020, Contaminated in-house environment contributes to the persistence and transmission of NDM-producing bacteria in a Chinese poultry farm. Environment International, 139: 105715. https://doi.org/10.1016/j.envint.2020.105715

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Published

2026-06-29

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PALMARES, Aaron Jan, MORABE , Jianina Lauryne, PARAZO, Ma. Liezl, MADDARA, Mary Izabelle, RODAS, Dyve John, PLACINO , Erica, RODRIGUEZ III, Reynato and NICOLAS, Cybelle Alyxes. Escherichia coli concentrations and antibiotic resistance profile in nearshore waters of Manila Bay, Philippines. Ecological Questions. Online. 29 June 2026. Vol. 37, no. 3, pp. 1-18. [Accessed 24 July 2026]. DOI 10.12775/EQ.2026.033.
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Copyright (c) 2026 Aaron Jan Palmares, Jianina Lauryne Morabe , Ma. Liezl Parazo, Mary Izabelle Maddara, Dyve John Rodas, Erica Placino , Reynato Rodriguez III, Cybelle Alyxes Nicolas

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