Gut Microbiota, Exercise, and Athletic Performance: Current Evidence and Clinical Implications
DOI:
https://doi.org/10.12775/QS.2026.78.76646Keywords
gut microbiota, exercise physiology, gut-muscle axis, short-chain fatty acids, atheltic performance, probiotics, sports nutritionAbstract
Background. The gut microbiota dynamically regulates energy metabolism, mucosal immunity, and systemic homeostasis [1]. In active populations, exercise-microbiome interactions influence athletic performance, adaptation, and recovery [2, 5].
Aim. To critically synthesize empirical evidence on the gut-muscle and gut-brain-muscle axes, evaluate athletic microbial adaptations, address methodological limitations, and provide clinical guidance for sports nutrition.
Material and methods. A review of literature (2020–2026) was conducted across PubMed, Web of Science, and Scopus, encompassing RCTs, athletic cohort studies, and translational models [1-24].
Results. Exercise modulates microbial taxonomy and metabolic output in an intensity-dependent manner [14]. Training enriches SCFA-producing taxa (Akkermansia muciniphila, Faecalibacterium prausnitzii) and alters bile acid signaling [12, 23]. Metabolites like deoxycholic acid and butyrate stimulate AMPK-PGC1α and TGR5-cAMP-PKA pathways, enhancing endurance [23]. Exercise reinforces tight junctions (ZO-1, Occludin), reducing endotoxemia (LBP, sCD14) and systemic inflammation [9, 22]. Targeted interventions—pre-sleep casein with probiotics [15], dietary fiber [24], polyphenols [3, 18], and low-FODMAP diets [16]—effectively alleviate gastrointestinal symptoms, boost power, and optimize recovery.
Conclusions. The gut-muscle and gut-brain-muscle axes are pivotal for physical resilience. Combining microbiome profiling with targeted nutrition offers strong potential for precision sports medicine [1, 20].
References
[1] Alsinani, Y., Rostamkhani, F., & Shirvani, H. (2026). Exercise and the gut microbiome: From mechanisms to clinical applications. Nutrients, 18(10), 1565. https://doi.org/10.3390/nu18101565
[2] Ampe, T., Decroix, L., De Pauw, K., Meeusen, R., Demuyser, T., & Roelands, B. (2025). Nutritional and physiological demands shape the gut microbiome of female World Tour cyclists. Microorganisms, 13(10), 2345. https://doi.org/10.3390/microorganisms13102345
[3] Annunziata, G., Camajani, E., Galasso, M., Verde, L., Caprio, M., Muscogiuri, G., Paoli, A., & Barrea, L. (2025). Antioxidants and exercise performance: Focus on Mediterranean diet. Antioxidants, 15(1), 10. https://doi.org/10.3390/antiox15010010
[4] Carlone, J., Solarino, G., Giampaoli, S., Alladio, E., Rosellini, G., Cibba, M., Parisi, A., Fasano, A., & Tessitore, A. (2026). Athlete or season? Gut microbiota variance in elite volleyball players: A compositional performance-based reanalysis. Sports, 14(7), 292. https://doi.org/10.3390/sports14070292
[5] Henningsen, K., Gaskell, S. K., Young, P., Mika, A., Henry, R., & Costa, R. J. S. (2025). The impact of ultra-marathon running on the gut microbiota as determined by faecal bacterial profiling, and its relationship with exercise-associated gastrointestinal symptoms: An exploratory investigation. Nutrients, 17(20), 3275. https://doi.org/10.3390/nu17203275
[6] Jäger, R., Heileson, J. L., Abou Sawan, S., Dickerson, B. L., Leonard, M., Kreider, R. B., Kerksick, C. M., Cornish, S. M., Candow, D. G., Cordingley, D. M., Forbes, S. C., Tinsley, G. M., Bongiovanni, T., Cannataro, R., Campbell, B. I., Arent, S. M., Stout, J. R., Kalman, D. S., & Antonio, J. (2025). International Society of Sports Nutrition Position Stand: Long-chain omega-3 polyunsaturated fatty acids. Journal of the International Society of Sports Nutrition, 22(1), 2441775. https://doi.org/10.1080/15502783.2024.2441775
[7] Liu, G., Li, Y., Wang, J., Yan, L., Shang, X., Shao, D., Jiang, C., Yin, D., & Shi, J. (2026). Microbial dysbiosis exacerbates exercise fatigue in mice under hypobaric hypoxia. Journal of Applied Microbiology, 137(9), lxag217. https://doi.org/10.1093/jambio/lxag217
[8] Llanos, P., Pires-Valero, R., Rojas-Paillal, J., More, J., Silva-Olivares, F., da Silva, L. A., Astudillo-Guerrero, C., Urrutia, P. J., Figueroa-Ajraz, F., Ibacache-Quiroga, C., Nevzorova, Y. A., Cubero, F. J., & Jorquera, G. (2026). Chronic swimming routine promotes gut microbiota remodeling and improvements in physical resilience, episodic-like memory, and inflammatory status in late middle-aged mice. Aging and Disease, 17(4), e0192. https://doi.org/10.14336/AD.2026.0192
[9] Moschonis, G., Dacaya, P., Truong, T. T., Amoruso, A., & Pane, M. (2026). Modulation of glucose homeostasis, metabolic endotoxemia and circulating short-chain fatty acids following multi-species probiotic supplementation: Findings from a 12-week randomised placebo-controlled trial. Nutrients, 18(7), 1025. https://doi.org/10.3390/nu18071025
[10] Nazari, H., Meibodi, A. E., Bassami, M., Olfatifar, M., & Yadegar, A. (2025). Association of gut microbiota with performance level among Iranian professional and semi-professional runners: A cross-sectional study. Health Science Reports, 8(10), e71319. https://doi.org/10.1002/hsr2.71319
[11] Nieman, D. C., Sakaguchi, C. A., Williams, J. C., Lawson, J., Lambirth, K. C., Omar, A. M., Mulani, F. A., & Zhang, Q. (2025). Gut Prevotella copri abundance linked to elevated post-exercise inflammation. Journal of Sport and Health Science, 14(12), 101039. https://doi.org/10.1016/j.jshs.2025.101039
[12] Odriozola, A., González, A., Odriozola, I., Corbi, F., & Álvarez-Herms, J. (2025). Thyroid-microbiome allostasis and mitochondrial performance: An integrative perspective in exercise physiology. Nutrients, 18(1), 59. https://doi.org/10.3390/nu18010059
[13] Phelps, C. M., & Meisel, M. (2026). Exercise-driven microbiome changes regulate host immunity. Trends in Immunology, 47(8), S1471-4906. https://doi.org/10.1016/j.it.2026.08.001
[14] Reljic, D., Hermann, H. J., Dieterich, W., Neurath, M. F., & Zopf, Y. (2025). Exercise improves gut microbial metabolites in an intensity-dependent manner: A pooled analysis of randomized controlled trials. Gut Microbes, 17(1), 2579354. https://doi.org/10.1080/19490976.2025.2579354
[15] Sadeghi, R., Hemmatinafar, M., Eftekhari, F., Imanian, B., & Koureshfard, N. (2025). Pre-sleep casein ingestion with probiotic strains improves anaerobic power and lower-body-specific strength and power performance in soccer players. Journal of the International Society of Sports Nutrition, 22(1), 2505184. https://doi.org/10.1080/15502783.2024.2505184
[16] Scrivin, R., Martinez, I., Henningsen, K., Slater, G., Henry, R., Anderson, D., & Costa, R. J. S. (2026). Faecal bacterial and short-chain fatty acid profiles in response to 48 h FODMAP intervention prior to endurance exercise. Nutrients, 18(12), 1886. https://doi.org/10.3390/nu18121886
[17] Song, Y., Dong, T., Fu, Z., Ao, X., Zhao, G., Chen, Y., Du, J., Wang, W., Sun, C., & Tian, Z. (2026). Isoquercetin ameliorates obesity-associated muscle atrophy and modulates the gut microbiota-bile acid axis. Journal of Agricultural and Food Chemistry, 74(14), 11561-11578. https://doi.org/10.1021/acs.jafc.5c16221
[18] Spears, M. L., Gurney, S. C., & Miles, M. P. (2026). Polyphenols, gut microbiota, and exercise triad supports performance. The Journal of Nutrition, 156(10), 101791. https://doi.org/10.1016/j.tjnut.2026.101791
[19] Su, C., Lan, J., Chen, H., & Wang, D. (2026). Gut microbiota of sprint athletes: Signature microbes and dietary links. Frontiers in Nutrition, 13, 1855417. https://doi.org/10.3389/fnut.2026.1855417
[20] Taslim, N. A., Sibarani, J. N., Alfaray, R. I., Mayulu, N., Mustika, A., Kumalawati, D. A., Permatasari, H. K., Tjandrawinata, R. R., & Nurkolis, F. (2026). The gut-brain-muscle axis: Microbial regulation of neuromuscular aging and cognitive frailty. Microorganisms, 14(6), 1366. https://doi.org/10.3390/microorganisms14061366
[21] Venckunas, T., Chaillou, T., Cesanelli, L., Satkunskiene, D., Rutkauskas, S., Snieckus, A., Minderis, P., Nikitina, D., Skieceviciene, J., Kupcinskas, J., Webersberger, L., Lanner, J. T., Mickevicius, M., Gumauskiene, B., Kuzmickaite, A., Subocius, A., & Kamandulis, S. (2026). Musculoskeletal (mal)adaptations in response to a >30 000-km running challenge. Journal of Cachexia, Sarcopenia and Muscle, 17(5), e70368. https://doi.org/10.1002/jcsm.70368
[22] Wang, H., Jin, Z., Di, S., & Alizadeh, H. (2026). Exercise-induced exerkines: Multi-nodal suppression of the NLRP3 inflammasome and translational potential. Medicinal Research Reviews, 46(5), 1455-1472. https://doi.org/10.1002/med.70063
[23] Yin, X., Chen, X., Yang, G., Li, G., Liang, H., Song, J., Zhang, J., Yao, L., Xue, R., Xing, Y., Zhang, Y., & Ma, B. (2026). Gut microbiota-derived deoxycholic acid mediates the exercise performance-potentiating efficacy of gypenosides. Phytomedicine, 153, 157950. https://doi.org/10.1016/j.phymed.2026.157950
[24] Zha, Y., Xiang, M., Zuo, Y., Liu, D., & Wang, Q. (2025). High-dose dietary fibre supplementation enhances the gut microbiome, health, and athletic performance of college basketball players. International Journal for Vitamin and Nutrition Research, 95(5), 37069. https://doi.org/10.31083/IJVNR37069
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